Skip to content

Layer

This page contains classes from hakowan.grammar.layer module.

Immutable-by-default layer grammar and composition helpers.

Layer dataclass

Specify data, marks, channels, transforms, labels, and annotations.

hakowan.layer is an alias for this class. Fluent methods return wrapper layers by default, preserving the original layer for reuse.

Source code in hakowan/grammar/layer/layer.py
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
@dataclass(kw_only=True, slots=True)
class Layer:
    """Specify data, marks, channels, transforms, labels, and annotations.

    ``hakowan.layer`` is an alias for this class. Fluent methods return wrapper
    layers by default, preserving the original layer for reuse.
    """

    _spec: LayerSpec = field(default_factory=LayerSpec)
    _children: list["Layer"] = field(default_factory=list)

    # Juxtaposition layout. ``None`` for a plain layer or an overlay node (``+``);
    # a :class:`LayoutOptions` for a juxtaposition node (``|`` / ``juxtapose``).
    _layout: LayoutOptions | None = None

    def __init__(
        self,
        data: DataFrameLike | None = None,
        *,
        positions: PositionColumns = None,
        mark: Mark | None = None,
        channels: list[Channel] | None = None,
        transform: Transform | None = None,
        name: str | None = None,
        annotations: list[Annotation] | None = None,
    ):
        """Initialize a layer specification.

        Args:
            data: Any source supported by :func:`hakowan.dataframe.to_dataframe`.
            positions: Position columns for pandas or xarray inputs; inferred
                from ``x``, ``y``, and optional ``z`` when omitted.
            mark: Optional point, curve, or surface mark.
            channels: Initial channel specifications.
            transform: Initial transform chain.
            name: Human-readable layer label used by interactive viewers.
            annotations: Initial screen-space annotations.

        """
        self._spec = LayerSpec()
        self._children = []
        self._layout = None

        if data is not None:
            self.data(data, positions=positions, in_place=True)
        if mark is not None:
            self.mark(mark, in_place=True)
        if transform is not None:
            self.transform(transform, in_place=True)
        if channels is not None:
            self._spec.channels = channels
        if name is not None:
            self._spec.name = name
        if annotations is not None:
            self._spec.annotations = list(annotations)

    def __add__(self, other: "Layer") -> "Layer":
        """Combine two layers into a composite layer.

        Args:
            other (Layer): The other layer to be combined with.

        Returns:
            (Layer): The composite layer.

        """
        parent = Layer()
        parent._children = [self, other]
        return parent

    def juxtapose(
        self,
        *others: "Layer",
        axis: int | Literal["x", "y", "z"] | None = None,
        gap: float | None = None,
        normalize: bool | None = None,
    ) -> "Layer":
        """Lay out this layer and ``others`` side by side for comparison.

        Unlike ``+`` (which overlays layers in the same coordinate space), this
        creates a *juxtaposition* node whose operands are translated apart along
        ``axis`` at compile time so they sit next to each other.

        Any argument left as ``None`` uses the corresponding default from
        :class:`LayoutOptions` (horizontal row, small gap, true relative scale).

        Args:
            *others (Layer): The other layer(s) to place beside this one.
            axis (int | str, optional): Layout axis, ``"x"`` / ``"y"`` / ``"z"``
                (or ``0`` / ``1`` / ``2``).
            gap (float, optional): Signed spacing between cells, as a fraction of
                the mean cell diameter. Negative values move cells closer together.
            normalize (bool, optional): If ``True``, scale each cell to equal
                size before placing them; otherwise preserve true relative scale.

        Returns:
            (Layer): The composite juxtaposition layer.

        """
        if len(others) == 0:
            raise ValueError("juxtapose() requires at least one other layer.")

        options = LayoutOptions()
        if axis is not None:
            match axis:
                case "x" | 0:
                    options.axis = 0
                case "y" | 1:
                    options.axis = 1
                case "z" | 2:
                    options.axis = 2
                case _:
                    raise ValueError(f"Unsupported layout axis: {axis!r}!")
        if gap is not None:
            options.gap = float(gap)
        if normalize is not None:
            options.normalize = bool(normalize)

        parent = Layer()
        parent._children = [self, *others]
        parent._layout = options
        return parent

    def __or__(self, other: "Layer") -> "Layer":
        """Lay out two layers side by side for comparison.

        ``l1 | l2`` is shorthand for ``l1.juxtapose(l2)`` using default layout
        parameters (horizontal row, true scale).

        Args:
            other (Layer): The layer to place beside this one.

        Returns:
            (Layer): The composite juxtaposition layer.

        """
        return self.juxtapose(other)

    def __and__(self, other: "Layer") -> "Layer":
        """Lay out two layers stacked vertically for comparison.

        ``l1 & l2`` is shorthand for ``l1.juxtapose(l2, axis="y")`` — a vertical
        column, in contrast to the horizontal row produced by ``|``.

        Note:
            Python binds ``&`` tighter than ``|``, so ``a | b & c`` parses as
            ``a | (b & c)``. Parenthesise when mixing the two operators.

        Args:
            other (Layer): The layer to place below this one.

        Returns:
            (Layer): The composite juxtaposition layer.

        """
        return self.juxtapose(other, axis="y")

    def __get_working_layer(self, in_place: bool = False) -> "Layer":
        if in_place:
            return self
        else:
            layer = Layer()
            layer._children = [self]
            return layer

    def __compose_affine(self, layer: "Layer", matrix: npt.ArrayLike) -> None:
        """Pre-compose ``Affine(matrix)`` onto ``layer``'s transform in place.

        The new affine becomes the *head* of the transform chain. Because
        ``apply_transform`` evaluates the chain tail-first, this makes successive
        in-place ``translate`` / ``rotate`` / ``scale`` calls apply in call order
        — matching the non-in-place path, where each call wraps the previous
        layer and the compiler accumulates transforms root-first.
        """
        affine = Affine(matrix)
        if layer._spec.transform is None:
            layer._spec.transform = affine
        else:
            layer._spec.transform = affine * layer._spec.transform

    def data(
        self,
        data: DataFrameLike,
        *,
        positions: PositionColumns = None,
        roi_box: npt.ArrayLike | None = None,
        in_place: bool = False,
    ) -> "Layer":
        """Overwrite this layer's data component.

        Args:
            data: Mesh path, SurfaceMesh, point array, pandas DataFrame,
                xarray Dataset, PyVista dataset, Trimesh object, or existing
                Hakowan DataFrame.
            positions: Position column names for pandas and xarray inputs.
                Hakowan infers ``x, y, z`` or ``x, y`` when omitted.
            roi_box: Optional region-of-interest bounds.
            in_place: Modify this layer rather than returning a copy.

        """
        layer = self.__get_working_layer(in_place)
        layer._spec.data = to_dataframe(data, positions=positions, roi_box=roi_box)
        return layer

    def mark(self, mark: Mark | _MarkStr, *, in_place: bool = False) -> "Layer":
        """Overwrite the mark component of this layer.

        Args:
            mark (Mark | str): The new mark component. When a string is given, accepted
                values are ``"point"`` / ``"Point"`` / ``"POINT"``,
                ``"curve"`` / ``"Curve"`` / ``"CURVE"``, and
                ``"surface"`` / ``"Surface"`` / ``"SURFACE"``.
            in_place (bool, optional): Whether to modify the current layer in place or create new
                layer. Defaults to False (i.e. create a new layer).

        Returns:
            result (Layer): The layer object with mark component overwritten.

        """
        layer = self.__get_working_layer(in_place)
        match mark:
            case Mark():
                layer._spec.mark = mark
            case "point" | "Point" | "POINT":
                layer._spec.mark = Mark.Point
            case "curve" | "Curve" | "CURVE":
                layer._spec.mark = Mark.Curve
            case "surface" | "Surface" | "SURFACE":
                layer._spec.mark = Mark.Surface
            case _:
                raise ValueError(f"Unsupported mark type: {mark}!")
        return layer

    def name(self, name: str, *, in_place: bool = False) -> "Layer":
        """Set a human-readable label for this layer.

        The name is surfaced as the layer's checkbox label in the interactive
        WebGL viewer (falling back to ``"Layer N"`` when unset).

        Args:
            name (str): The layer label.
            in_place (bool, optional): Whether to modify the current layer in place or create new
                layer. Defaults to False (i.e. create a new layer).

        Returns:
            result (Layer): The layer object with its name set.

        """
        layer = self.__get_working_layer(in_place)
        layer._spec.name = name
        return layer

    def annotate(
        self,
        annotation: Annotation | str,
        *,
        in_place: bool = False,
        **kwargs: Any,
    ) -> "Layer":
        """Add a screen-space text annotation.

        A string is shorthand for ``Annotation(text=annotation, **kwargs)``.
        The returned wrapper follows the same immutable-by-default behavior as
        the other layer methods.
        """
        layer = self.__get_working_layer(in_place)
        if isinstance(annotation, str):
            annotation = Annotation(text=annotation, **kwargs)
        elif kwargs:
            raise TypeError("Keyword options require a string annotation.")
        elif not isinstance(annotation, Annotation):
            raise TypeError(f"Unsupported annotation type: {type(annotation)!r}")
        layer._spec.annotations.append(annotation)
        return layer

    def channel(
        self,
        *,
        position: Position | AttributeLike | None = None,
        normal: Normal | AttributeLike | None = None,
        size: float | Size | AttributeLike | None = None,
        shape: _BaseShapeStr | Shape | None = None,
        vector_field: VectorField | str | None = None,
        covariance: Covariance | str | None = None,
        material: Material | None = None,
        bump_map: BumpMap | TextureLike | None = None,
        normal_map: NormalMap | TextureLike | None = None,
        in_place: bool = False,
    ) -> "Layer":
        """Add visual channels to this layer node.

        Each keyword names a semantic slot, so one call may set several
        independent channels. Calls are immutable by default: a new wrapper
        node is created around the current layer. During compilation, nodes are
        visited from root to leaf and the first channel for each slot wins.
        Therefore a later fluent call overrides the same slot on the wrapped
        child, while unrelated slots compose. With ``in_place=True``, channels
        append directly to the current node in keyword order and the earlier
        channel of the same kind remains effective.

        Args:
            position: Position channel or attribute reference.
            normal: Surface normal channel or attribute reference.
            size: Constant size, Size channel, or scalar attribute reference.
            shape: Point-glyph primitive or Shape channel.
            vector_field: VectorField channel or attribute name.
            covariance: Covariance channel or attribute name.
            material: Material channel.
            bump_map: BumpMap channel or texture shorthand.
            normal_map: NormalMap channel or texture shorthand.
            in_place: Append to this node instead of creating a wrapper layer.

        Returns:
            The modified node or an immutable-style wrapper layer.

        """
        layer = self.__get_working_layer(in_place)

        def convert(value, cls):
            if isinstance(value, (str, Attribute)):
                return cls(data=to_attribute(value))
            return value

        if position is not None:
            assert isinstance(position, (Position, str, Attribute)), (
                f"Unsupported position type: {type(position)}!"
            )
            layer._spec.channels.append(convert(position, Position))
        if normal is not None:
            assert isinstance(normal, (Normal, str, Attribute)), (
                f"Unsupported normal type: {type(normal)}!"
            )
            layer._spec.channels.append(convert(normal, Normal))
        if size is not None:
            if isinstance(size, (int, float)):
                layer._spec.channels.append(Size(data=float(size)))
            else:
                assert isinstance(size, (Size, str, Attribute)), (
                    f"Unsupported size type: {type(size)}!"
                )
                layer._spec.channels.append(convert(size, Size))
        if shape is not None:
            if isinstance(shape, str):
                layer._spec.channels.append(Shape(base_shape=shape))
            else:
                assert isinstance(shape, Shape), (
                    f"Unsupported shape type: {type(shape)}!"
                )
                layer._spec.channels.append(shape)
        if vector_field is not None:
            assert isinstance(vector_field, (VectorField, str)), (
                f"Unsupported vector_field type: {type(vector_field)}!"
            )
            layer._spec.channels.append(convert(vector_field, VectorField))
        if covariance is not None:
            assert isinstance(covariance, (Covariance, str)), (
                f"Unsupported covariance type: {type(covariance)}!"
            )
            layer._spec.channels.append(convert(covariance, Covariance))
        if material is not None:
            layer._spec.channels.append(material)
        if bump_map is not None:
            if isinstance(bump_map, BumpMap):
                layer._spec.channels.append(bump_map)
            else:
                layer._spec.channels.append(BumpMap(bump_map))
        if normal_map is not None:
            if isinstance(normal_map, NormalMap):
                layer._spec.channels.append(normal_map)
            else:
                layer._spec.channels.append(NormalMap(normal_map))
        return layer

    def material(
        self, type: _MaterialTypeStr, *args: Any, in_place: bool = False, **kwargs: Any
    ) -> "Layer":
        """Add a material channel constructed from a registered material kind.

        Args:
            type: Case-insensitive material kind: diffuse, conductor,
                rough_conductor, plastic, rough_plastic, principled,
                thin_principled, dielectric, thin_dielectric,
                rough_dielectric, or hair.
            *args: Positional arguments forwarded to the material constructor.
            in_place: Append to this node instead of returning a wrapper layer.
            **kwargs: Keyword arguments forwarded to the material constructor.

        Returns:
            The modified node or an immutable-style wrapper layer.

        """
        layer = self.__get_working_layer(in_place)
        match type:
            case "diffuse" | "Diffuse" | "DIFFUSE":
                layer._spec.channels.append(Diffuse(*args, **kwargs))
            case "conductor" | "Conductor" | "CONDUCTOR":
                layer._spec.channels.append(Conductor(*args, **kwargs))
            case "rough_conductor" | "RoughConductor" | "ROUGH_CONDUCTOR":
                layer._spec.channels.append(RoughConductor(*args, **kwargs))
            case "plastic" | "Plastic" | "PLASTIC":
                layer._spec.channels.append(Plastic(*args, **kwargs))
            case "rough_plastic" | "RoughPlastic" | "ROUGH_PLASTIC":
                layer._spec.channels.append(RoughPlastic(*args, **kwargs))
            case "principled" | "Principled" | "PRINCIPLED":
                layer._spec.channels.append(Principled(*args, **kwargs))
            case "thin_principled" | "ThinPrincipled" | "THIN_PRINCIPLED":
                layer._spec.channels.append(ThinPrincipled(*args, **kwargs))
            case "dielectric" | "Dielectric" | "DIELECTRIC":
                layer._spec.channels.append(Dielectric(*args, **kwargs))
            case "thin_dielectric" | "ThinDielectric" | "THIN_DIELECTRIC":
                layer._spec.channels.append(ThinDielectric(*args, **kwargs))
            case "rough_dielectric" | "RoughDielectric" | "ROUGH_DIELECTRIC":
                layer._spec.channels.append(RoughDielectric(*args, **kwargs))
            case "hair" | "Hair" | "HAIR":
                layer._spec.channels.append(Hair(*args, **kwargs))
            case _:
                raise ValueError(f"Unsupported material type: {type}!")
        return layer

    def color_by(
        self,
        attribute: AttributeLike,
        *,
        colormap: str | list[ColorLike] | None = None,
        domain: tuple[float, float] | None = None,
        range: tuple[float, float] | None = None,
        categories: bool = False,
        reverse: bool = False,
        legend: bool | Legend = True,
        two_sided: bool = False,
    ) -> "Layer":
        """Map a scalar attribute to diffuse color and an automatic legend.

        ``hkw.layer(data).color_by("temperature")`` is the shortest supported
        scalar-field workflow. Domain inference, the ``viridis`` colormap, and
        a semantic legend are enabled by default. The shorthand expands to a
        Diffuse material containing a ScalarField, so canonical serialization
        uses only the ordinary grammar models.
        """
        texture = ScalarField(
            data=attribute,
            colormap=colormap,
            domain=domain,
            range=range,
            categories=categories,
            reverse=reverse,
            legend=legend,
        )
        return self.channel(material=Diffuse(reflectance=texture, two_sided=two_sided))

    def show_edges(
        self,
        *,
        color: ColorLike = "black",
        width: float = 0.005,
        width_space: Literal["world", "scene", "screen"] = "scene",
        name: str | None = "Edges",
    ) -> "Layer":
        """Overlay mesh edges with an explicit thickness value space.

        ``width`` is visible diameter for ``scene`` and ``screen`` spaces. In
        ``scene`` space it is a fraction of the compiled scene or ROI-box
        diagonal; in ``screen`` space it is pixels at the camera target plane.
        ``world`` retains the legacy radius-in-geometry-units behavior.
        """
        if width <= 0.0:
            raise ValueError("Edge width must be positive")
        edges = self.mark(Mark.Curve).channel(
            size=Size(data=width, space=width_space),
            material=Diffuse(reflectance=color),
        )
        if name is not None:
            edges = edges.name(name)
        return self + edges

    def glyph_vectors(
        self,
        attribute: AttributeLike,
        *,
        scale: float = 1.0,
        size: float = 0.01,
        color: ColorLike = "black",
        normalize: bool = False,
        end_type: Literal["point", "arrow", "flat"] = "arrow",
        refinement_level: int = 0,
        style: CurveStyle | None = None,
        overlay: bool = True,
        name: str | None = "Vectors",
    ) -> "Layer":
        """Create vector glyphs and optionally overlay them on this layer.

        ``scale`` controls glyph length, ``size`` controls thickness, and
        ``overlay=False`` returns only the generated curve-mark layer.
        """
        if scale <= 0.0 or size <= 0.0:
            raise ValueError("Vector scale and size must be positive")
        vector_attribute = copy.deepcopy(to_attribute(attribute))
        length_scale = UniformScale(factor=scale)
        vector_attribute.scale = (
            length_scale
            if vector_attribute.scale is None
            else to_scale(vector_attribute.scale) * length_scale
        )
        glyphs = (
            self.mark(Mark.Curve)
            .channel(
                vector_field=VectorField(
                    data=vector_attribute,
                    refinement_level=refinement_level,
                    style=style,
                    end_type=end_type,
                    normalize=normalize,
                ),
                size=size,
            )
            .channel(material=Diffuse(reflectance=color))
        )
        if name is not None:
            glyphs = glyphs.name(name)
        return self + glyphs if overlay else glyphs

    def slice(
        self,
        normal: npt.ArrayLike,
        *,
        offset: float = 0.0,
        point: npt.ArrayLike | None = None,
    ) -> "Layer":
        """Clip geometry to the positive side of a normalized plane.

        ``offset`` is signed distance along ``normal``. Use ``point`` instead to
        define a plane through an explicit point; the two forms are exclusive.
        """
        vector = np.asarray(normal, dtype=np.float64)
        if vector.shape != (3,) or np.linalg.norm(vector) <= 1e-12:
            raise ValueError("Slice normal must be a non-zero three-vector")
        vector /= np.linalg.norm(vector)
        if point is not None and offset != 0.0:
            raise ValueError("Specify either point or offset, not both")
        plane_point = (
            vector * float(offset)
            if point is None
            else np.asarray(point, dtype=np.float64)
        )
        if plane_point.shape != (3,):
            raise ValueError("Slice point must contain three values")
        return self.transform(Clip(point=plane_point, normal=vector))

    def isolate_component(
        self,
        component: int,
        *,
        attribute: str = "component",
        compute: bool = True,
    ) -> "Layer":
        """Keep one connected component or one existing scalar component label.

        With ``compute=True``, connected facet components are first written to
        ``attribute``. With ``compute=False``, that attribute must already exist.
        """
        if not attribute:
            raise ValueError("Component attribute name must not be empty")
        from ...spec.expression import compile_expression

        selection = Filter(
            data=attribute,
            condition=compile_expression(f"value == {int(component)}"),
        )
        transform = selection * Compute(component=attribute) if compute else selection
        return self.transform(transform)

    def compare(
        self,
        other: "Layer",
        *,
        axis: int | Literal["x", "y", "z"] = "x",
        gap: float = 0.05,
        normalize: bool = False,
        labels: tuple[str, str] | None = None,
    ) -> "Layer":
        """Juxtapose this layer and ``other`` with optional labels.

        Labels name WebGL layer controls; static backends do not draw them.
        This shorthand delegates to :meth:`juxtapose` and preserves the
        canonical layout representation.
        """
        left, right = self, other
        if labels is not None:
            if len(labels) != 2:
                raise ValueError("Comparison labels must contain exactly two values")
            left = left.name(labels[0])
            right = right.name(labels[1])
        return left.juxtapose(right, axis=axis, gap=gap, normalize=normalize)

    def transform(self, transform: Transform, *, in_place: bool = False) -> "Layer":
        """Overwrite the transform component of this layer.

        Args:
            transform (Transform): The new transform component.
            in_place (bool, optional): Whether to modify the current layer in place or create new
                layer. Defaults to False (i.e. create a new layer).

        Returns:
            result (Layer): The layer object with transform component overwritten.

        """
        layer = self.__get_working_layer(in_place)
        layer._spec.transform = transform
        return layer

    def rotate(
        self, axis: npt.ArrayLike, angle: float, in_place: bool = False
    ) -> "Layer":
        """Update the transform component of the current layer by applying a rotation.

        Args:
            axis (npt.ArrayLike): The unit rotation axis.
            angle (float): The rotation angle (in radians).
            in_place (bool, optional): Whether to modify the current layer in place or create new
                layer. Defaults to False (i.e. create a new layer).

        Returns:
            result (Layer): The layer object with transform component updated.

        """
        layer = self.__get_working_layer(in_place)
        v = np.array(axis, dtype=np.float64)
        eye3 = np.eye(3)
        H = np.outer(v, v)
        S = np.cross(eye3, v)
        M = eye3 * np.cos(angle) + S * np.sin(angle) + H * (1 - np.cos(angle))
        self.__compose_affine(layer, M)
        return layer

    def translate(self, offset: npt.ArrayLike, in_place: bool = False) -> "Layer":
        """Update the transform component of the current layer by applying a translation.

        Args:
            offset (npt.ArrayLike): The translation offset.
            in_place (bool, optional): Whether to modify the current layer in place or create new
                layer. Defaults to False (i.e. create a new layer).

        Returns:
            result (Layer): The layer object with transform component updated.

        """
        layer = self.__get_working_layer(in_place)
        M = np.eye(4)
        M[:3, 3] = np.array(offset, dtype=np.float64)
        self.__compose_affine(layer, M)
        return layer

    def scale(self, factor: float, in_place: bool = False) -> "Layer":
        """Update the transform component of the current layer by applying uniform scaling.

        Args:
            factor (float): The scaling factor.
            in_place (bool, optional): Whether to modify the current layer in place or create new
                layer. Defaults to False (i.e. create a new layer).

        Returns:
            result (Layer): The layer object with transform component updated.

        """
        layer = self.__get_working_layer(in_place)
        M = np.eye(4)
        M[0, 0] = M[1, 1] = M[2, 2] = factor
        self.__compose_affine(layer, M)
        return layer

    def to_spec(self, *, data_ids=None, function_ids=None):
        """Convert this layer tree to a canonical, validated specification."""
        from ...spec import to_spec

        return to_spec(self, data_ids=data_ids, function_ids=function_ids)

    def to_json(
        self,
        *,
        data_ids=None,
        function_ids=None,
        indent: int | None = 2,
        canonical: bool = False,
    ) -> str:
        """Serialize this layer tree as canonical Hakowan JSON."""
        return self.to_spec(data_ids=data_ids, function_ids=function_ids).to_json(
            indent=indent, canonical=canonical
        )

    @property
    def children(self) -> list["Layer"]:
        """Get the child layers of this layer."""
        return self._children

    @children.setter
    def children(self, value: Sequence["Layer"]) -> None:
        """Set the child layers of this layer."""
        self._children = list(value)

    def _repr_html_(self) -> str:
        """Return an interactive Three.js viewer for Jupyter display.

        Requires the ``pygltflib`` package (WebGL backend).  If it is not
        installed the method falls back to a plain-text representation.
        """
        try:
            from ...backends.webgl import WebGLBackend
        except ImportError:
            return (
                "<pre>Install pygltflib for inline preview: pip install pygltflib</pre>"
            )
        try:
            from ...compiler import compile as _compile
            from ...compiler import prepare_scene
            from ...setup.config import Config

            config = Config()
            scene = prepare_scene(_compile(self), config)
            html_str = WebGLBackend().html_string(scene, config)
        except Exception as exc:
            return f"<pre>hakowan preview error: {exc}</pre>"

        # Embed the full HTML page in an srcdoc iframe.
        # Double-quotes inside srcdoc must be entity-encoded.
        escaped = html_str.replace("&", "&amp;").replace('"', "&quot;")
        return (
            f'<iframe srcdoc="{escaped}" width="100%" height="500"'
            f' style="border:none;"></iframe>'
        )

children property writable

Get the child layers of this layer.

__add__(other)

Combine two layers into a composite layer.

Parameters:

Name Type Description Default
other Layer

The other layer to be combined with.

required

Returns:

Type Description
Layer

The composite layer.

Source code in hakowan/grammar/layer/layer.py
def __add__(self, other: "Layer") -> "Layer":
    """Combine two layers into a composite layer.

    Args:
        other (Layer): The other layer to be combined with.

    Returns:
        (Layer): The composite layer.

    """
    parent = Layer()
    parent._children = [self, other]
    return parent

__and__(other)

Lay out two layers stacked vertically for comparison.

l1 & l2 is shorthand for l1.juxtapose(l2, axis="y") — a vertical column, in contrast to the horizontal row produced by |.

Note

Python binds & tighter than |, so a | b & c parses as a | (b & c). Parenthesise when mixing the two operators.

Parameters:

Name Type Description Default
other Layer

The layer to place below this one.

required

Returns:

Type Description
Layer

The composite juxtaposition layer.

Source code in hakowan/grammar/layer/layer.py
def __and__(self, other: "Layer") -> "Layer":
    """Lay out two layers stacked vertically for comparison.

    ``l1 & l2`` is shorthand for ``l1.juxtapose(l2, axis="y")`` — a vertical
    column, in contrast to the horizontal row produced by ``|``.

    Note:
        Python binds ``&`` tighter than ``|``, so ``a | b & c`` parses as
        ``a | (b & c)``. Parenthesise when mixing the two operators.

    Args:
        other (Layer): The layer to place below this one.

    Returns:
        (Layer): The composite juxtaposition layer.

    """
    return self.juxtapose(other, axis="y")

__compose_affine(layer, matrix)

Pre-compose Affine(matrix) onto layer's transform in place.

The new affine becomes the head of the transform chain. Because apply_transform evaluates the chain tail-first, this makes successive in-place translate / rotate / scale calls apply in call order — matching the non-in-place path, where each call wraps the previous layer and the compiler accumulates transforms root-first.

Source code in hakowan/grammar/layer/layer.py
def __compose_affine(self, layer: "Layer", matrix: npt.ArrayLike) -> None:
    """Pre-compose ``Affine(matrix)`` onto ``layer``'s transform in place.

    The new affine becomes the *head* of the transform chain. Because
    ``apply_transform`` evaluates the chain tail-first, this makes successive
    in-place ``translate`` / ``rotate`` / ``scale`` calls apply in call order
    — matching the non-in-place path, where each call wraps the previous
    layer and the compiler accumulates transforms root-first.
    """
    affine = Affine(matrix)
    if layer._spec.transform is None:
        layer._spec.transform = affine
    else:
        layer._spec.transform = affine * layer._spec.transform

__init__(data=None, *, positions=None, mark=None, channels=None, transform=None, name=None, annotations=None)

Initialize a layer specification.

Parameters:

Name Type Description Default
data DataFrameLike | None

Any source supported by :func:hakowan.dataframe.to_dataframe.

None
positions PositionColumns

Position columns for pandas or xarray inputs; inferred from x, y, and optional z when omitted.

None
mark Mark | None

Optional point, curve, or surface mark.

None
channels list[Channel] | None

Initial channel specifications.

None
transform Transform | None

Initial transform chain.

None
name str | None

Human-readable layer label used by interactive viewers.

None
annotations list[Annotation] | None

Initial screen-space annotations.

None
Source code in hakowan/grammar/layer/layer.py
def __init__(
    self,
    data: DataFrameLike | None = None,
    *,
    positions: PositionColumns = None,
    mark: Mark | None = None,
    channels: list[Channel] | None = None,
    transform: Transform | None = None,
    name: str | None = None,
    annotations: list[Annotation] | None = None,
):
    """Initialize a layer specification.

    Args:
        data: Any source supported by :func:`hakowan.dataframe.to_dataframe`.
        positions: Position columns for pandas or xarray inputs; inferred
            from ``x``, ``y``, and optional ``z`` when omitted.
        mark: Optional point, curve, or surface mark.
        channels: Initial channel specifications.
        transform: Initial transform chain.
        name: Human-readable layer label used by interactive viewers.
        annotations: Initial screen-space annotations.

    """
    self._spec = LayerSpec()
    self._children = []
    self._layout = None

    if data is not None:
        self.data(data, positions=positions, in_place=True)
    if mark is not None:
        self.mark(mark, in_place=True)
    if transform is not None:
        self.transform(transform, in_place=True)
    if channels is not None:
        self._spec.channels = channels
    if name is not None:
        self._spec.name = name
    if annotations is not None:
        self._spec.annotations = list(annotations)

__or__(other)

Lay out two layers side by side for comparison.

l1 | l2 is shorthand for l1.juxtapose(l2) using default layout parameters (horizontal row, true scale).

Parameters:

Name Type Description Default
other Layer

The layer to place beside this one.

required

Returns:

Type Description
Layer

The composite juxtaposition layer.

Source code in hakowan/grammar/layer/layer.py
def __or__(self, other: "Layer") -> "Layer":
    """Lay out two layers side by side for comparison.

    ``l1 | l2`` is shorthand for ``l1.juxtapose(l2)`` using default layout
    parameters (horizontal row, true scale).

    Args:
        other (Layer): The layer to place beside this one.

    Returns:
        (Layer): The composite juxtaposition layer.

    """
    return self.juxtapose(other)

annotate(annotation, *, in_place=False, **kwargs)

Add a screen-space text annotation.

A string is shorthand for Annotation(text=annotation, **kwargs). The returned wrapper follows the same immutable-by-default behavior as the other layer methods.

Source code in hakowan/grammar/layer/layer.py
def annotate(
    self,
    annotation: Annotation | str,
    *,
    in_place: bool = False,
    **kwargs: Any,
) -> "Layer":
    """Add a screen-space text annotation.

    A string is shorthand for ``Annotation(text=annotation, **kwargs)``.
    The returned wrapper follows the same immutable-by-default behavior as
    the other layer methods.
    """
    layer = self.__get_working_layer(in_place)
    if isinstance(annotation, str):
        annotation = Annotation(text=annotation, **kwargs)
    elif kwargs:
        raise TypeError("Keyword options require a string annotation.")
    elif not isinstance(annotation, Annotation):
        raise TypeError(f"Unsupported annotation type: {type(annotation)!r}")
    layer._spec.annotations.append(annotation)
    return layer

channel(*, position=None, normal=None, size=None, shape=None, vector_field=None, covariance=None, material=None, bump_map=None, normal_map=None, in_place=False)

Add visual channels to this layer node.

Each keyword names a semantic slot, so one call may set several independent channels. Calls are immutable by default: a new wrapper node is created around the current layer. During compilation, nodes are visited from root to leaf and the first channel for each slot wins. Therefore a later fluent call overrides the same slot on the wrapped child, while unrelated slots compose. With in_place=True, channels append directly to the current node in keyword order and the earlier channel of the same kind remains effective.

Parameters:

Name Type Description Default
position Position | AttributeLike | None

Position channel or attribute reference.

None
normal Normal | AttributeLike | None

Surface normal channel or attribute reference.

None
size float | Size | AttributeLike | None

Constant size, Size channel, or scalar attribute reference.

None
shape _BaseShapeStr | Shape | None

Point-glyph primitive or Shape channel.

None
vector_field VectorField | str | None

VectorField channel or attribute name.

None
covariance Covariance | str | None

Covariance channel or attribute name.

None
material Material | None

Material channel.

None
bump_map BumpMap | TextureLike | None

BumpMap channel or texture shorthand.

None
normal_map NormalMap | TextureLike | None

NormalMap channel or texture shorthand.

None
in_place bool

Append to this node instead of creating a wrapper layer.

False

Returns:

Type Description
Layer

The modified node or an immutable-style wrapper layer.

Source code in hakowan/grammar/layer/layer.py
def channel(
    self,
    *,
    position: Position | AttributeLike | None = None,
    normal: Normal | AttributeLike | None = None,
    size: float | Size | AttributeLike | None = None,
    shape: _BaseShapeStr | Shape | None = None,
    vector_field: VectorField | str | None = None,
    covariance: Covariance | str | None = None,
    material: Material | None = None,
    bump_map: BumpMap | TextureLike | None = None,
    normal_map: NormalMap | TextureLike | None = None,
    in_place: bool = False,
) -> "Layer":
    """Add visual channels to this layer node.

    Each keyword names a semantic slot, so one call may set several
    independent channels. Calls are immutable by default: a new wrapper
    node is created around the current layer. During compilation, nodes are
    visited from root to leaf and the first channel for each slot wins.
    Therefore a later fluent call overrides the same slot on the wrapped
    child, while unrelated slots compose. With ``in_place=True``, channels
    append directly to the current node in keyword order and the earlier
    channel of the same kind remains effective.

    Args:
        position: Position channel or attribute reference.
        normal: Surface normal channel or attribute reference.
        size: Constant size, Size channel, or scalar attribute reference.
        shape: Point-glyph primitive or Shape channel.
        vector_field: VectorField channel or attribute name.
        covariance: Covariance channel or attribute name.
        material: Material channel.
        bump_map: BumpMap channel or texture shorthand.
        normal_map: NormalMap channel or texture shorthand.
        in_place: Append to this node instead of creating a wrapper layer.

    Returns:
        The modified node or an immutable-style wrapper layer.

    """
    layer = self.__get_working_layer(in_place)

    def convert(value, cls):
        if isinstance(value, (str, Attribute)):
            return cls(data=to_attribute(value))
        return value

    if position is not None:
        assert isinstance(position, (Position, str, Attribute)), (
            f"Unsupported position type: {type(position)}!"
        )
        layer._spec.channels.append(convert(position, Position))
    if normal is not None:
        assert isinstance(normal, (Normal, str, Attribute)), (
            f"Unsupported normal type: {type(normal)}!"
        )
        layer._spec.channels.append(convert(normal, Normal))
    if size is not None:
        if isinstance(size, (int, float)):
            layer._spec.channels.append(Size(data=float(size)))
        else:
            assert isinstance(size, (Size, str, Attribute)), (
                f"Unsupported size type: {type(size)}!"
            )
            layer._spec.channels.append(convert(size, Size))
    if shape is not None:
        if isinstance(shape, str):
            layer._spec.channels.append(Shape(base_shape=shape))
        else:
            assert isinstance(shape, Shape), (
                f"Unsupported shape type: {type(shape)}!"
            )
            layer._spec.channels.append(shape)
    if vector_field is not None:
        assert isinstance(vector_field, (VectorField, str)), (
            f"Unsupported vector_field type: {type(vector_field)}!"
        )
        layer._spec.channels.append(convert(vector_field, VectorField))
    if covariance is not None:
        assert isinstance(covariance, (Covariance, str)), (
            f"Unsupported covariance type: {type(covariance)}!"
        )
        layer._spec.channels.append(convert(covariance, Covariance))
    if material is not None:
        layer._spec.channels.append(material)
    if bump_map is not None:
        if isinstance(bump_map, BumpMap):
            layer._spec.channels.append(bump_map)
        else:
            layer._spec.channels.append(BumpMap(bump_map))
    if normal_map is not None:
        if isinstance(normal_map, NormalMap):
            layer._spec.channels.append(normal_map)
        else:
            layer._spec.channels.append(NormalMap(normal_map))
    return layer

color_by(attribute, *, colormap=None, domain=None, range=None, categories=False, reverse=False, legend=True, two_sided=False)

Map a scalar attribute to diffuse color and an automatic legend.

hkw.layer(data).color_by("temperature") is the shortest supported scalar-field workflow. Domain inference, the viridis colormap, and a semantic legend are enabled by default. The shorthand expands to a Diffuse material containing a ScalarField, so canonical serialization uses only the ordinary grammar models.

Source code in hakowan/grammar/layer/layer.py
def color_by(
    self,
    attribute: AttributeLike,
    *,
    colormap: str | list[ColorLike] | None = None,
    domain: tuple[float, float] | None = None,
    range: tuple[float, float] | None = None,
    categories: bool = False,
    reverse: bool = False,
    legend: bool | Legend = True,
    two_sided: bool = False,
) -> "Layer":
    """Map a scalar attribute to diffuse color and an automatic legend.

    ``hkw.layer(data).color_by("temperature")`` is the shortest supported
    scalar-field workflow. Domain inference, the ``viridis`` colormap, and
    a semantic legend are enabled by default. The shorthand expands to a
    Diffuse material containing a ScalarField, so canonical serialization
    uses only the ordinary grammar models.
    """
    texture = ScalarField(
        data=attribute,
        colormap=colormap,
        domain=domain,
        range=range,
        categories=categories,
        reverse=reverse,
        legend=legend,
    )
    return self.channel(material=Diffuse(reflectance=texture, two_sided=two_sided))

compare(other, *, axis='x', gap=0.05, normalize=False, labels=None)

Juxtapose this layer and other with optional labels.

Labels name WebGL layer controls; static backends do not draw them. This shorthand delegates to :meth:juxtapose and preserves the canonical layout representation.

Source code in hakowan/grammar/layer/layer.py
def compare(
    self,
    other: "Layer",
    *,
    axis: int | Literal["x", "y", "z"] = "x",
    gap: float = 0.05,
    normalize: bool = False,
    labels: tuple[str, str] | None = None,
) -> "Layer":
    """Juxtapose this layer and ``other`` with optional labels.

    Labels name WebGL layer controls; static backends do not draw them.
    This shorthand delegates to :meth:`juxtapose` and preserves the
    canonical layout representation.
    """
    left, right = self, other
    if labels is not None:
        if len(labels) != 2:
            raise ValueError("Comparison labels must contain exactly two values")
        left = left.name(labels[0])
        right = right.name(labels[1])
    return left.juxtapose(right, axis=axis, gap=gap, normalize=normalize)

data(data, *, positions=None, roi_box=None, in_place=False)

Overwrite this layer's data component.

Parameters:

Name Type Description Default
data DataFrameLike

Mesh path, SurfaceMesh, point array, pandas DataFrame, xarray Dataset, PyVista dataset, Trimesh object, or existing Hakowan DataFrame.

required
positions PositionColumns

Position column names for pandas and xarray inputs. Hakowan infers x, y, z or x, y when omitted.

None
roi_box ArrayLike | None

Optional region-of-interest bounds.

None
in_place bool

Modify this layer rather than returning a copy.

False
Source code in hakowan/grammar/layer/layer.py
def data(
    self,
    data: DataFrameLike,
    *,
    positions: PositionColumns = None,
    roi_box: npt.ArrayLike | None = None,
    in_place: bool = False,
) -> "Layer":
    """Overwrite this layer's data component.

    Args:
        data: Mesh path, SurfaceMesh, point array, pandas DataFrame,
            xarray Dataset, PyVista dataset, Trimesh object, or existing
            Hakowan DataFrame.
        positions: Position column names for pandas and xarray inputs.
            Hakowan infers ``x, y, z`` or ``x, y`` when omitted.
        roi_box: Optional region-of-interest bounds.
        in_place: Modify this layer rather than returning a copy.

    """
    layer = self.__get_working_layer(in_place)
    layer._spec.data = to_dataframe(data, positions=positions, roi_box=roi_box)
    return layer

glyph_vectors(attribute, *, scale=1.0, size=0.01, color='black', normalize=False, end_type='arrow', refinement_level=0, style=None, overlay=True, name='Vectors')

Create vector glyphs and optionally overlay them on this layer.

scale controls glyph length, size controls thickness, and overlay=False returns only the generated curve-mark layer.

Source code in hakowan/grammar/layer/layer.py
def glyph_vectors(
    self,
    attribute: AttributeLike,
    *,
    scale: float = 1.0,
    size: float = 0.01,
    color: ColorLike = "black",
    normalize: bool = False,
    end_type: Literal["point", "arrow", "flat"] = "arrow",
    refinement_level: int = 0,
    style: CurveStyle | None = None,
    overlay: bool = True,
    name: str | None = "Vectors",
) -> "Layer":
    """Create vector glyphs and optionally overlay them on this layer.

    ``scale`` controls glyph length, ``size`` controls thickness, and
    ``overlay=False`` returns only the generated curve-mark layer.
    """
    if scale <= 0.0 or size <= 0.0:
        raise ValueError("Vector scale and size must be positive")
    vector_attribute = copy.deepcopy(to_attribute(attribute))
    length_scale = UniformScale(factor=scale)
    vector_attribute.scale = (
        length_scale
        if vector_attribute.scale is None
        else to_scale(vector_attribute.scale) * length_scale
    )
    glyphs = (
        self.mark(Mark.Curve)
        .channel(
            vector_field=VectorField(
                data=vector_attribute,
                refinement_level=refinement_level,
                style=style,
                end_type=end_type,
                normalize=normalize,
            ),
            size=size,
        )
        .channel(material=Diffuse(reflectance=color))
    )
    if name is not None:
        glyphs = glyphs.name(name)
    return self + glyphs if overlay else glyphs

isolate_component(component, *, attribute='component', compute=True)

Keep one connected component or one existing scalar component label.

With compute=True, connected facet components are first written to attribute. With compute=False, that attribute must already exist.

Source code in hakowan/grammar/layer/layer.py
def isolate_component(
    self,
    component: int,
    *,
    attribute: str = "component",
    compute: bool = True,
) -> "Layer":
    """Keep one connected component or one existing scalar component label.

    With ``compute=True``, connected facet components are first written to
    ``attribute``. With ``compute=False``, that attribute must already exist.
    """
    if not attribute:
        raise ValueError("Component attribute name must not be empty")
    from ...spec.expression import compile_expression

    selection = Filter(
        data=attribute,
        condition=compile_expression(f"value == {int(component)}"),
    )
    transform = selection * Compute(component=attribute) if compute else selection
    return self.transform(transform)

juxtapose(*others, axis=None, gap=None, normalize=None)

Lay out this layer and others side by side for comparison.

Unlike + (which overlays layers in the same coordinate space), this creates a juxtaposition node whose operands are translated apart along axis at compile time so they sit next to each other.

Any argument left as None uses the corresponding default from :class:LayoutOptions (horizontal row, small gap, true relative scale).

Parameters:

Name Type Description Default
*others Layer

The other layer(s) to place beside this one.

()
axis int | str

Layout axis, "x" / "y" / "z" (or 0 / 1 / 2).

None
gap float

Signed spacing between cells, as a fraction of the mean cell diameter. Negative values move cells closer together.

None
normalize bool

If True, scale each cell to equal size before placing them; otherwise preserve true relative scale.

None

Returns:

Type Description
Layer

The composite juxtaposition layer.

Source code in hakowan/grammar/layer/layer.py
def juxtapose(
    self,
    *others: "Layer",
    axis: int | Literal["x", "y", "z"] | None = None,
    gap: float | None = None,
    normalize: bool | None = None,
) -> "Layer":
    """Lay out this layer and ``others`` side by side for comparison.

    Unlike ``+`` (which overlays layers in the same coordinate space), this
    creates a *juxtaposition* node whose operands are translated apart along
    ``axis`` at compile time so they sit next to each other.

    Any argument left as ``None`` uses the corresponding default from
    :class:`LayoutOptions` (horizontal row, small gap, true relative scale).

    Args:
        *others (Layer): The other layer(s) to place beside this one.
        axis (int | str, optional): Layout axis, ``"x"`` / ``"y"`` / ``"z"``
            (or ``0`` / ``1`` / ``2``).
        gap (float, optional): Signed spacing between cells, as a fraction of
            the mean cell diameter. Negative values move cells closer together.
        normalize (bool, optional): If ``True``, scale each cell to equal
            size before placing them; otherwise preserve true relative scale.

    Returns:
        (Layer): The composite juxtaposition layer.

    """
    if len(others) == 0:
        raise ValueError("juxtapose() requires at least one other layer.")

    options = LayoutOptions()
    if axis is not None:
        match axis:
            case "x" | 0:
                options.axis = 0
            case "y" | 1:
                options.axis = 1
            case "z" | 2:
                options.axis = 2
            case _:
                raise ValueError(f"Unsupported layout axis: {axis!r}!")
    if gap is not None:
        options.gap = float(gap)
    if normalize is not None:
        options.normalize = bool(normalize)

    parent = Layer()
    parent._children = [self, *others]
    parent._layout = options
    return parent

mark(mark, *, in_place=False)

Overwrite the mark component of this layer.

Parameters:

Name Type Description Default
mark Mark | str

The new mark component. When a string is given, accepted values are "point" / "Point" / "POINT", "curve" / "Curve" / "CURVE", and "surface" / "Surface" / "SURFACE".

required
in_place bool

Whether to modify the current layer in place or create new layer. Defaults to False (i.e. create a new layer).

False

Returns:

Name Type Description
result Layer

The layer object with mark component overwritten.

Source code in hakowan/grammar/layer/layer.py
def mark(self, mark: Mark | _MarkStr, *, in_place: bool = False) -> "Layer":
    """Overwrite the mark component of this layer.

    Args:
        mark (Mark | str): The new mark component. When a string is given, accepted
            values are ``"point"`` / ``"Point"`` / ``"POINT"``,
            ``"curve"`` / ``"Curve"`` / ``"CURVE"``, and
            ``"surface"`` / ``"Surface"`` / ``"SURFACE"``.
        in_place (bool, optional): Whether to modify the current layer in place or create new
            layer. Defaults to False (i.e. create a new layer).

    Returns:
        result (Layer): The layer object with mark component overwritten.

    """
    layer = self.__get_working_layer(in_place)
    match mark:
        case Mark():
            layer._spec.mark = mark
        case "point" | "Point" | "POINT":
            layer._spec.mark = Mark.Point
        case "curve" | "Curve" | "CURVE":
            layer._spec.mark = Mark.Curve
        case "surface" | "Surface" | "SURFACE":
            layer._spec.mark = Mark.Surface
        case _:
            raise ValueError(f"Unsupported mark type: {mark}!")
    return layer

material(type, *args, in_place=False, **kwargs)

Add a material channel constructed from a registered material kind.

Parameters:

Name Type Description Default
type _MaterialTypeStr

Case-insensitive material kind: diffuse, conductor, rough_conductor, plastic, rough_plastic, principled, thin_principled, dielectric, thin_dielectric, rough_dielectric, or hair.

required
*args Any

Positional arguments forwarded to the material constructor.

()
in_place bool

Append to this node instead of returning a wrapper layer.

False
**kwargs Any

Keyword arguments forwarded to the material constructor.

{}

Returns:

Type Description
Layer

The modified node or an immutable-style wrapper layer.

Source code in hakowan/grammar/layer/layer.py
def material(
    self, type: _MaterialTypeStr, *args: Any, in_place: bool = False, **kwargs: Any
) -> "Layer":
    """Add a material channel constructed from a registered material kind.

    Args:
        type: Case-insensitive material kind: diffuse, conductor,
            rough_conductor, plastic, rough_plastic, principled,
            thin_principled, dielectric, thin_dielectric,
            rough_dielectric, or hair.
        *args: Positional arguments forwarded to the material constructor.
        in_place: Append to this node instead of returning a wrapper layer.
        **kwargs: Keyword arguments forwarded to the material constructor.

    Returns:
        The modified node or an immutable-style wrapper layer.

    """
    layer = self.__get_working_layer(in_place)
    match type:
        case "diffuse" | "Diffuse" | "DIFFUSE":
            layer._spec.channels.append(Diffuse(*args, **kwargs))
        case "conductor" | "Conductor" | "CONDUCTOR":
            layer._spec.channels.append(Conductor(*args, **kwargs))
        case "rough_conductor" | "RoughConductor" | "ROUGH_CONDUCTOR":
            layer._spec.channels.append(RoughConductor(*args, **kwargs))
        case "plastic" | "Plastic" | "PLASTIC":
            layer._spec.channels.append(Plastic(*args, **kwargs))
        case "rough_plastic" | "RoughPlastic" | "ROUGH_PLASTIC":
            layer._spec.channels.append(RoughPlastic(*args, **kwargs))
        case "principled" | "Principled" | "PRINCIPLED":
            layer._spec.channels.append(Principled(*args, **kwargs))
        case "thin_principled" | "ThinPrincipled" | "THIN_PRINCIPLED":
            layer._spec.channels.append(ThinPrincipled(*args, **kwargs))
        case "dielectric" | "Dielectric" | "DIELECTRIC":
            layer._spec.channels.append(Dielectric(*args, **kwargs))
        case "thin_dielectric" | "ThinDielectric" | "THIN_DIELECTRIC":
            layer._spec.channels.append(ThinDielectric(*args, **kwargs))
        case "rough_dielectric" | "RoughDielectric" | "ROUGH_DIELECTRIC":
            layer._spec.channels.append(RoughDielectric(*args, **kwargs))
        case "hair" | "Hair" | "HAIR":
            layer._spec.channels.append(Hair(*args, **kwargs))
        case _:
            raise ValueError(f"Unsupported material type: {type}!")
    return layer

name(name, *, in_place=False)

Set a human-readable label for this layer.

The name is surfaced as the layer's checkbox label in the interactive WebGL viewer (falling back to "Layer N" when unset).

Parameters:

Name Type Description Default
name str

The layer label.

required
in_place bool

Whether to modify the current layer in place or create new layer. Defaults to False (i.e. create a new layer).

False

Returns:

Name Type Description
result Layer

The layer object with its name set.

Source code in hakowan/grammar/layer/layer.py
def name(self, name: str, *, in_place: bool = False) -> "Layer":
    """Set a human-readable label for this layer.

    The name is surfaced as the layer's checkbox label in the interactive
    WebGL viewer (falling back to ``"Layer N"`` when unset).

    Args:
        name (str): The layer label.
        in_place (bool, optional): Whether to modify the current layer in place or create new
            layer. Defaults to False (i.e. create a new layer).

    Returns:
        result (Layer): The layer object with its name set.

    """
    layer = self.__get_working_layer(in_place)
    layer._spec.name = name
    return layer

rotate(axis, angle, in_place=False)

Update the transform component of the current layer by applying a rotation.

Parameters:

Name Type Description Default
axis ArrayLike

The unit rotation axis.

required
angle float

The rotation angle (in radians).

required
in_place bool

Whether to modify the current layer in place or create new layer. Defaults to False (i.e. create a new layer).

False

Returns:

Name Type Description
result Layer

The layer object with transform component updated.

Source code in hakowan/grammar/layer/layer.py
def rotate(
    self, axis: npt.ArrayLike, angle: float, in_place: bool = False
) -> "Layer":
    """Update the transform component of the current layer by applying a rotation.

    Args:
        axis (npt.ArrayLike): The unit rotation axis.
        angle (float): The rotation angle (in radians).
        in_place (bool, optional): Whether to modify the current layer in place or create new
            layer. Defaults to False (i.e. create a new layer).

    Returns:
        result (Layer): The layer object with transform component updated.

    """
    layer = self.__get_working_layer(in_place)
    v = np.array(axis, dtype=np.float64)
    eye3 = np.eye(3)
    H = np.outer(v, v)
    S = np.cross(eye3, v)
    M = eye3 * np.cos(angle) + S * np.sin(angle) + H * (1 - np.cos(angle))
    self.__compose_affine(layer, M)
    return layer

scale(factor, in_place=False)

Update the transform component of the current layer by applying uniform scaling.

Parameters:

Name Type Description Default
factor float

The scaling factor.

required
in_place bool

Whether to modify the current layer in place or create new layer. Defaults to False (i.e. create a new layer).

False

Returns:

Name Type Description
result Layer

The layer object with transform component updated.

Source code in hakowan/grammar/layer/layer.py
def scale(self, factor: float, in_place: bool = False) -> "Layer":
    """Update the transform component of the current layer by applying uniform scaling.

    Args:
        factor (float): The scaling factor.
        in_place (bool, optional): Whether to modify the current layer in place or create new
            layer. Defaults to False (i.e. create a new layer).

    Returns:
        result (Layer): The layer object with transform component updated.

    """
    layer = self.__get_working_layer(in_place)
    M = np.eye(4)
    M[0, 0] = M[1, 1] = M[2, 2] = factor
    self.__compose_affine(layer, M)
    return layer

show_edges(*, color='black', width=0.005, width_space='scene', name='Edges')

Overlay mesh edges with an explicit thickness value space.

width is visible diameter for scene and screen spaces. In scene space it is a fraction of the compiled scene or ROI-box diagonal; in screen space it is pixels at the camera target plane. world retains the legacy radius-in-geometry-units behavior.

Source code in hakowan/grammar/layer/layer.py
def show_edges(
    self,
    *,
    color: ColorLike = "black",
    width: float = 0.005,
    width_space: Literal["world", "scene", "screen"] = "scene",
    name: str | None = "Edges",
) -> "Layer":
    """Overlay mesh edges with an explicit thickness value space.

    ``width`` is visible diameter for ``scene`` and ``screen`` spaces. In
    ``scene`` space it is a fraction of the compiled scene or ROI-box
    diagonal; in ``screen`` space it is pixels at the camera target plane.
    ``world`` retains the legacy radius-in-geometry-units behavior.
    """
    if width <= 0.0:
        raise ValueError("Edge width must be positive")
    edges = self.mark(Mark.Curve).channel(
        size=Size(data=width, space=width_space),
        material=Diffuse(reflectance=color),
    )
    if name is not None:
        edges = edges.name(name)
    return self + edges

slice(normal, *, offset=0.0, point=None)

Clip geometry to the positive side of a normalized plane.

offset is signed distance along normal. Use point instead to define a plane through an explicit point; the two forms are exclusive.

Source code in hakowan/grammar/layer/layer.py
def slice(
    self,
    normal: npt.ArrayLike,
    *,
    offset: float = 0.0,
    point: npt.ArrayLike | None = None,
) -> "Layer":
    """Clip geometry to the positive side of a normalized plane.

    ``offset`` is signed distance along ``normal``. Use ``point`` instead to
    define a plane through an explicit point; the two forms are exclusive.
    """
    vector = np.asarray(normal, dtype=np.float64)
    if vector.shape != (3,) or np.linalg.norm(vector) <= 1e-12:
        raise ValueError("Slice normal must be a non-zero three-vector")
    vector /= np.linalg.norm(vector)
    if point is not None and offset != 0.0:
        raise ValueError("Specify either point or offset, not both")
    plane_point = (
        vector * float(offset)
        if point is None
        else np.asarray(point, dtype=np.float64)
    )
    if plane_point.shape != (3,):
        raise ValueError("Slice point must contain three values")
    return self.transform(Clip(point=plane_point, normal=vector))

to_json(*, data_ids=None, function_ids=None, indent=2, canonical=False)

Serialize this layer tree as canonical Hakowan JSON.

Source code in hakowan/grammar/layer/layer.py
def to_json(
    self,
    *,
    data_ids=None,
    function_ids=None,
    indent: int | None = 2,
    canonical: bool = False,
) -> str:
    """Serialize this layer tree as canonical Hakowan JSON."""
    return self.to_spec(data_ids=data_ids, function_ids=function_ids).to_json(
        indent=indent, canonical=canonical
    )

to_spec(*, data_ids=None, function_ids=None)

Convert this layer tree to a canonical, validated specification.

Source code in hakowan/grammar/layer/layer.py
def to_spec(self, *, data_ids=None, function_ids=None):
    """Convert this layer tree to a canonical, validated specification."""
    from ...spec import to_spec

    return to_spec(self, data_ids=data_ids, function_ids=function_ids)

transform(transform, *, in_place=False)

Overwrite the transform component of this layer.

Parameters:

Name Type Description Default
transform Transform

The new transform component.

required
in_place bool

Whether to modify the current layer in place or create new layer. Defaults to False (i.e. create a new layer).

False

Returns:

Name Type Description
result Layer

The layer object with transform component overwritten.

Source code in hakowan/grammar/layer/layer.py
def transform(self, transform: Transform, *, in_place: bool = False) -> "Layer":
    """Overwrite the transform component of this layer.

    Args:
        transform (Transform): The new transform component.
        in_place (bool, optional): Whether to modify the current layer in place or create new
            layer. Defaults to False (i.e. create a new layer).

    Returns:
        result (Layer): The layer object with transform component overwritten.

    """
    layer = self.__get_working_layer(in_place)
    layer._spec.transform = transform
    return layer

translate(offset, in_place=False)

Update the transform component of the current layer by applying a translation.

Parameters:

Name Type Description Default
offset ArrayLike

The translation offset.

required
in_place bool

Whether to modify the current layer in place or create new layer. Defaults to False (i.e. create a new layer).

False

Returns:

Name Type Description
result Layer

The layer object with transform component updated.

Source code in hakowan/grammar/layer/layer.py
def translate(self, offset: npt.ArrayLike, in_place: bool = False) -> "Layer":
    """Update the transform component of the current layer by applying a translation.

    Args:
        offset (npt.ArrayLike): The translation offset.
        in_place (bool, optional): Whether to modify the current layer in place or create new
            layer. Defaults to False (i.e. create a new layer).

    Returns:
        result (Layer): The layer object with transform component updated.

    """
    layer = self.__get_working_layer(in_place)
    M = np.eye(4)
    M[:3, 3] = np.array(offset, dtype=np.float64)
    self.__compose_affine(layer, M)
    return layer

LayoutOptions dataclass

Parameters for a juxtaposition (|) layout.

This is the single source of truth for the layout defaults; everywhere else just constructs or reads a :class:LayoutOptions.

Source code in hakowan/grammar/layer/layer.py
@dataclass
class LayoutOptions:
    """Parameters for a juxtaposition (``|``) layout.

    This is the single source of truth for the layout defaults; everywhere else
    just constructs or reads a :class:`LayoutOptions`.
    """

    axis: int = 0  # layout axis: 0 = x, 1 = y, 2 = z
    gap: float = 0.05  # spacing between cells, as a fraction of mean cell diameter
    normalize: bool = False  # scale each cell to equal size before placing
    reverse: bool = False  # place children in decreasing axis order

grid(layers, *, columns=None, rows=None, column_axis='x', row_axis='y', gap=0.05, row_gap=None, column_gap=None, normalize=False)

Arrange a flat sequence of layers into a row-major grid.

Exactly one of columns or rows determines where the input sequence wraps. Rows are displayed from top to bottom, and a ragged final row is centered on the column axis. The result contains only ordinary transform and juxtaposition nodes, so it uses the standard layer serialization and backend paths.

Parameters:

Name Type Description Default
layers Sequence[Layer]

Layers in row-major order.

required
columns int | None

Maximum number of cells per row.

None
rows int | None

Maximum number of rows; column count is inferred.

None
column_axis int | Literal['x', 'y', 'z']

Axis along which each row is packed.

'x'
row_axis int | Literal['x', 'y', 'z']

Axis along which rows are stacked.

'y'
gap float

Default signed spacing for both directions, as a fraction of mean cell size. Negative values move cells closer together.

0.05
row_gap float | None

Optional signed spacing override between rows.

None
column_gap float | None

Optional signed spacing override between columns.

None
normalize bool

Normalize each input layer before packing so cells have a common scale, including cells in a ragged final row.

False

Returns:

Type Description
Layer

A standard composed layer containing the grid.

Source code in hakowan/grammar/layer/layer.py
def grid(
    layers: Sequence[Layer],
    *,
    columns: int | None = None,
    rows: int | None = None,
    column_axis: int | Literal["x", "y", "z"] = "x",
    row_axis: int | Literal["x", "y", "z"] = "y",
    gap: float = 0.05,
    row_gap: float | None = None,
    column_gap: float | None = None,
    normalize: bool = False,
) -> Layer:
    """Arrange a flat sequence of layers into a row-major grid.

    Exactly one of ``columns`` or ``rows`` determines where the input sequence
    wraps. Rows are displayed from top to bottom, and a ragged final row is
    centered on the column axis. The result contains only ordinary transform
    and juxtaposition nodes, so it uses the standard layer serialization and
    backend paths.

    Args:
        layers: Layers in row-major order.
        columns: Maximum number of cells per row.
        rows: Maximum number of rows; column count is inferred.
        column_axis: Axis along which each row is packed.
        row_axis: Axis along which rows are stacked.
        gap: Default signed spacing for both directions, as a fraction of mean
            cell size. Negative values move cells closer together.
        row_gap: Optional signed spacing override between rows.
        column_gap: Optional signed spacing override between columns.
        normalize: Normalize each input layer before packing so cells have a
            common scale, including cells in a ragged final row.

    Returns:
        A standard composed layer containing the grid.
    """
    cells = list(layers)
    if not cells:
        raise ValueError("grid() requires at least one layer")
    if not all(isinstance(cell, Layer) for cell in cells):
        raise TypeError("grid() inputs must all be Layer instances")
    if (columns is None) == (rows is None):
        raise ValueError("grid() requires exactly one of columns or rows")

    extent = columns if columns is not None else rows
    if isinstance(extent, bool) or not isinstance(extent, int) or extent <= 0:
        raise ValueError("grid() rows and columns must be positive integers")

    if rows is not None:
        columns = (len(cells) + rows - 1) // rows
    assert columns is not None
    resolved_row_gap = gap if row_gap is None else row_gap
    resolved_column_gap = gap if column_gap is None else column_gap

    if normalize and len(cells) > 1:
        cells = [cell.transform(NormalizeTransform()) for cell in cells]

    row_cells = [cells[i : i + columns] for i in range(0, len(cells), columns)]
    row_layers = [
        row[0]
        if len(row) == 1
        else row[0].juxtapose(*row[1:], axis=column_axis, gap=resolved_column_gap)
        for row in row_cells
    ]
    if len(row_layers) == 1:
        return row_layers[0]

    result = row_layers[0].juxtapose(
        *row_layers[1:], axis=row_axis, gap=resolved_row_gap
    )

    assert result._layout is not None
    result._layout.reverse = True
    return result